We have released a new version of our versatile analysis tool developed to Find Enriched Regions (FindER) in ChIP-Seq datasets. FindER is intended to overcome the sequence depth limitations of many existing tools and provides a common mechanism for identifying enrichment from localized (e.g. H3K4me3, DNA-protein binding), dispersed (e.g. H3K27me3, H3K36me3), or mixed (e.g. H3K4me1) ChIP-Seq signal profiles.
Version 1.0.1 is compatible with hg38 and is available on our Software Tools page